Remove AutoSSL and switch to LetsEncrypt Issue

Hi My Cpanel License has expired on my server and I do not plan to renew it. (The server really doesn't need Cpanel and i have a few other licenses on other servers, so i definitely love the product :) ) I also know that leaving Cpanel on a server with an expired license is not ideal and a fresh OS install is always recommended. However, please understand in my current situation I am unable to start fresh again. I am getting email messages that AutoSSL is unable to renew my SSL certificates which is expiring in 5 days!. This, of course, is because I don't have an active license on this server. I manually installed certbot-auto and was able to renew my SSL certificates that way. It gave me the congratulations message and SSL certficates expire in 90 days. However, when I went to check my SSL certificate status and I am still showing this Cpanel certificate expiring in 5 days. It's not picking up my new 90 day renewal with LE. Have i missed a step here? What if i don't want to use Cpanel certificates and want to uninstall AutoSSL manually from the command line. Which steps would i take for that? Any help would be greatly appreciated.